OpenConext / OpenConext/OpenConext-pdp

mySQL outage caused app hang

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Dominant language
Java
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9
Forks
7
Avg merge
11d 12h
Merged PRs (30d)
10

Description

This issue is imported from pivotal - Originaly created at Jul 9, 2024 by Bart Geesink

When mySQL goes away, the app stays down, even when mySQL comes back. The following stacktrace is posted:

2024-07-09 13:06:42,639 WARN [http-nio-8080-exec-11] o.s.b.a.jdbc.DataSourceHealthIndicator:94 - DataSource health check failed
org.springframework.jdbc.CannotGetJdbcConnectionException: Failed to obtain JDBC Connection; nested exception is java.sql.SQLTransientConnectionException: HikariPool-1 - Connection is not available, request timed out after 30000ms.
at org.springframework.jdbc.datasource.DataSourceUtils.getConnection(DataSourceUtils.java:84)
at org.springframework.jdbc.core.JdbcTemplate.execute(JdbcTemplate.java:332)
at org.springframework.boot.actuate.jdbc.DataSourceHealthIndicator.getProduct(DataSourceHealthIndicator.java:122)
at org.springframework.boot.actuate.jdbc.DataSourceHealthIndicator.doDataSourceHealthCheck(DataSourceHealthIndicator.java:105)
at org.springframework.boot.actuate.jdbc.DataSourceHealthIndicator.doHealthCheck(DataSourceHealthIndicator.java:100)
at org.springframework.boot.actuate.health.AbstractHealthIndicator.health(AbstractHealthIndicator.java:82)
at org.springframework.boot.actuate.health.HealthIndicator.getHealth(HealthIndicator.java:37)
at org.springframework.boot.actuate.health.HealthEndpointWebExtension.getHealth(HealthEndpointWebExtension.java:104)
at org.springframework.boot.actuate.health.HealthEndpointWebExtension.getHealth(HealthEndpointWebExtension.java:46)
at org.springframework.boot.actuate.health.HealthEndpointSupport.getLoggedHealth(HealthEndpointSupport.java:172)
at org.springframework.boot.actuate.health.HealthEndpointSupport.getContribution(HealthEndpointSupport.java:145)
at org.springframework.boot.actuate.health.HealthEndpointSupport.getAggregateContribution(HealthEndpointSupport.java:156)
at org.springframework.boot.actuate.health.HealthEndpointSupport.getContribution(HealthEndpointSupport.java:141)
at org.springframework.boot.actuate.health.HealthEndpointSupport.getHealth(HealthEndpointSupport.java:110)
at org.springframework.boot.actuate.health.HealthEndpointSupport.getHealth(HealthEndpointSupport.java:81)
at org.springframework.boot.actuate.health.HealthEndpointWebExtension.health(HealthEndpointWebExtension.java:90)
at org.springframework.boot.actuate.health.HealthEndpointWebExtension.health(HealthEndpointWebExtension.java:79)
at jdk.internal.reflect.GeneratedMethodAccessor26.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.util.ReflectionUtils.invokeMethod(ReflectionUtils.java:282)
at org.springframework.boot.actuate.endpoint.invoke.reflect.ReflectiveOperationInvoker.invoke(ReflectiveOperationInvoker.java:74)
at org.springframework.boot.actuate.endpoint.annotation.AbstractDiscoveredOperation.invoke(AbstractDiscoveredOperation.java:60)
at org.springframework.boot.actuate.endpoint.web.servlet.AbstractWebMvcEndpointHandlerMapping$ServletWebOperationAdapter.handle(AbstractWebMvcEndpointHandlerMapping.java:357)
at org.springframework.boot.actuate.endpoint.web.servlet.AbstractWebMvcEndpointHandlerMapping$OperationHandler.handle(AbstractWebMvcEndpointHandlerMapping.java:464)
at jdk.internal.reflect.GeneratedMethodAccessor24.invoke(Unknown Source)
at java.base/jdk.internal.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.base/java.lang.reflect.Method.invoke(Method.java:566)
at org.springframework.web.method.support.InvocableHandlerMethod.doInvoke(InvocableHandlerMethod.java:205)
at org.springframework.web.method.support.InvocableHandlerMethod.invokeForRequest(InvocableHandlerMethod.java:150)
at org.springframework.web.servlet.mvc.method.annotation.ServletInvocableHandlerMethod.invokeAndHandle(ServletInvocableHandlerMethod.java:117)
at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.invokeHandlerMethod(RequestMappingHandlerAdapter.java:895)
at org.springframework.web.servlet.mvc.method.annotation.RequestMappingHandlerAdapter.handleInternal(RequestMappingHandlerAdapter.java:808)
at org.springframework.web.servlet.mvc.method.AbstractHandlerMethodAdapter.handle(AbstractHandlerMethodAdapter.java:87)
at org.springframework.web.servlet.DispatcherServlet.doDispatch(DispatcherServlet.java:1072)
at org.springframework.web.servlet.DispatcherServlet.doService(DispatcherServlet.java:965)
at org.springframework.web.servlet.FrameworkServlet.processRequest(FrameworkServlet.java:1006)
at org.springframework.web.servlet.FrameworkServlet.doGet(FrameworkServlet.java:898)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:529)
at org.springframework.web.servlet.FrameworkServlet.service(FrameworkServlet.java:883)
at javax.servlet.http.HttpServlet.service(HttpServlet.java:623)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:209)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:153)
at org.apache.tomcat.websocket.server.WsFilter.doFilter(WsFilter.java:51)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:178)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:153)
at org.springframework.security.web.FilterChainProxy.doFilterInternal(FilterChainProxy.java:214)
at org.springframework.security.web.FilterChainProxy.doFilter(FilterChainProxy.java:186)
at org.springframework.web.filter.DelegatingFilterProxy.invokeDelegate(DelegatingFilterProxy.java:354)
at org.springframework.web.filter.DelegatingFilterProxy.doFilter(DelegatingFilterProxy.java:267)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:178)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:153)
at org.springframework.web.filter.RequestContextFilter.doFilterInternal(RequestContextFilter.java:100)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:178)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:153)
at org.springframework.web.filter.FormContentFilter.doFilterInternal(FormContentFilter.java:93)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:178)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:153)
at org.springframework.web.filter.CharacterEncodingFilter.doFilterInternal(CharacterEncodingFilter.java:201)
at org.springframework.web.filter.OncePerRequestFilter.doFilter(OncePerRequestFilter.java:117)
at org.apache.catalina.core.ApplicationFilterChain.internalDoFilter(ApplicationFilterChain.java:178)
at org.apache.catalina.core.ApplicationFilterChain.doFilter(ApplicationFilterChain.java:153)
at org.apache.catalina.core.StandardWrapperValve.invoke(StandardWrapperValve.java:168)
at org.apache.catalina.core.StandardContextValve.invoke(StandardContextValve.java:90)
at org.apache.catalina.authenticator.AuthenticatorBase.invoke(AuthenticatorBase.java:481)
at org.apache.catalina.core.StandardHostValve.invoke(StandardHostValve.java:130)
at org.apache.catalina.valves.ErrorReportValve.invoke(ErrorReportValve.java:93)
at org.apache.catalina.core.StandardEngineValve.invoke(StandardEngineValve.java:74)
at org.apache.catalina.connector.CoyoteAdapter.service(CoyoteAdapter.java:342)
at org.apache.coyote.http11.Http11Processor.service(Http11Processor.java:390)
at org.apache.coyote.AbstractProcessorLight.process(AbstractProcessorLight.java:63)
at org.apache.coyote.AbstractProtocol$ConnectionHandler.process(AbstractProtocol.java:928)
at org.apache.tomcat.util.net.NioEndpoint$SocketProcessor.doRun(NioEndpoint.java:1794)
at org.apache.tomcat.util.net.SocketProcessorBase.run(SocketProcessorBase.java:52)
at org.apache.tomcat.util.threads.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1191)
at org.apache.tomcat.util.threads.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:659)
at org.apache.tomcat.util.threads.TaskThread$WrappingRunnable.run(TaskThread.java:61)
at java.base/java.lang.Thread.run(Thread.java:829)
Caused by: java.sql.SQLTransientConnectionException: HikariPool-1 - Connection is not available, request timed out after 30000ms.
at com.zaxxer.hikari.pool.HikariPool.createTimeoutException(HikariPool.java:696)
at com.zaxxer.hikari.pool.HikariPool.getConnection(HikariPool.java:197)
at com.zaxxer.hikari.pool.HikariPool.getConnection(HikariPool.java:162)
at com.zaxxer.hikari.HikariDataSource.getConnection(HikariDataSource.java:128)
at org.springframework.jdbc.datasource.DataSourceUtils.fetchConnection(DataSourceUtils.java:160)
at org.springframework.jdbc.datasource.DataSourceUtils.doGetConnection(DataSourceUtils.java:118)
at org.springframework.jdbc.datasource.DataSourceUtils.getConnection(DataSourceUtils.java:81)
... 79 common frames omitted
Caused by: java.sql.SQLException: Connection.setNetworkTimeout cannot be called on a closed connection
at org.mariadb.jdbc.internal.util.exceptions.ExceptionMapper.getSqlException(ExceptionMapper.java:211)
at org.mariadb.jdbc.MariaDbConnection.setNetworkTimeout(MariaDbConnection.java:1632)
at com.zaxxer.hikari.pool.PoolBase.setNetworkTimeout(PoolBase.java:566)
at com.zaxxer.hikari.pool.PoolBase.isConnectionAlive(PoolBase.java:173)
at com.zaxxer.hikari.pool.HikariPool.getConnection(HikariPool.java:186)
... 84 common frames omitted
2024-07-09 13:06:42,639 WARN [http-nio-8080-exec-11] o.s.b.a.health.HealthEndpointSupport:181 - Health contributor org.springframework.boot.actuate.jdbc.DataSourceHealthIndicator (db) took 30000ms to respond

Same issue in Teams and AA

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

No repository files or tests are named. Start by tracing the Spring Boot DataSourceHealthIndicator, HikariPool, and MariaDbConnection entries in the stack trace, then reproduce a MySQL outage and recovery. Done means the application and health endpoint recover after MySQL returns without requests hanging.

Written by the indexing model from the issue text.

Assessment

Tech stack
java, mysql, spring-boot
Domain
backend, databases, observability
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
30/100

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