OHDSI / OHDSI/WebAPI

SkeletonCohortCharacterization still using http:// for dependencies

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Java
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Description

WebAPI currently references SkeletonCohortCharacterization v1.2.1:

https://github.com/OHDSI/WebAPI/blob/3f9e90c5a62dac4557f34f85b2d0ce70d58b439d/pom.xml#L1158-L1161

SkeletonCohortCharacterization v1.2.1 has http:// references to the OHDSI nexus repo (see here).

This then causes some warnings when compiling the .war file:

Downloaded from ohdsi: https://repo.ohdsi.org/nexus/content/groups/public/org/ohdsi/standardized-analysis-specs/1.2.1-SNAPSHOT/maven-metadata.xml (786 B at 6.9 kB/s)
[WARNING] Could not transfer metadata org.ohdsi:standardized-analysis-specs:1.2.1-SNAPSHOT/maven-metadata.xml from/to ohdsi.snapshots (http://repo.ohdsi.org:8085/nexus/content/repositories/snapshots): Read timed out
[WARNING] org.ohdsi:standardized-analysis-specs:1.2.1-SNAPSHOT/maven-metadata.xml failed to transfer from http://repo.ohdsi.org:8085/nexus/content/repositories/snapshots during a previous attempt. This failure was cached in the local repository and resolution will not be reattempted until the update interval of ohdsi.snapshots has elapsed or updates are forced. Original error: Could not transfer metadata org.ohdsi:standardized-analysis-specs:1.2.1-SNAPSHOT/maven-metadata.xml from/to ohdsi.snapshots (http://repo.ohdsi.org:8085/nexus/content/repositories/snapshots): Read timed out

Perhaps we can do a patch release of SkeletonCohortCharacterization to fix this particular warning when compiling WebAPI?

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with WebAPI's pom.xml at the dependency referenced around lines 1158-1161, then inspect the SkeletonCohortCharacterization pom.xml around lines 76-92. Confirm which repository URLs produce the warning during WebAPI compilation and determine whether the requested fix requires a SkeletonCohortCharacterization patch release. Done means the affected dependency no longer causes the reported HTTP repository warning.

Written by the indexing model from the issue text.

Assessment

Tech stack
java
Domain
build-system
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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