NatLabRockies / NatLabRockies/PRAS
Allow choosing specific sample seeds
Nobody has claimed this yet.
- Dominant language
- Julia
- Stars
- 76
- Forks
- 29
- PR merge metrics
- No merged PRs in 30d
Description
For more targeted analysis, allow specifying specific sample seeds to use, instead of just requiring every sample seed in 1:nsamples.
This has been implemented in PRAS-ED, but a more elegant approach would be to combine this with a broader refactoring of result collection to avoid allocating nthreads copies of each result accumulator (pass sample-level results into the result channel instead of entire result accumulators).
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by examining how sample seeds are selected and how result collection currently allocates result accumulators across threads. Compare the existing PRAS-ED implementation mentioned in the issue, then define completion as accepting a targeted set of sample seeds and passing sample-level results through the result channel without allocating nthreads copies of each accumulator.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- julia
- Domain
- data, performance
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 30/100