NVIDIA-BioNeMo / NVIDIA-BioNeMo/Proteina-Complexa
Masked target structure support
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- Dominant language
- Python
- Stars
- 432
- Forks
- 78
- Avg merge
- 10d 46m
- Merged PRs (30d)
- 1
Description
Thanks for this protein design tool.
I was wondering if there is the possibility to set a config option to mask the structure
of the target or the input PDB needs to be fixed (soft/hard?) as start condition for the generation/evaluation
Contributor guide
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by locating the configuration and inference paths that handle target structures and input PDB files, then determine whether masking belongs in generation, evaluation, or preprocessing. Clarify the intended soft versus hard masking behavior and define whether completion means a config option, documented input requirements, or both.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- machine-learning
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100