NVIDIA-BioNeMo / NVIDIA-BioNeMo/Proteina-Complexa

Fork adapted to Mac users, now available

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enhancement
Dominant language
Python
Stars
432
Forks
78
Avg merge
10d 46m
Merged PRs (30d)
1

Description

Hello,

Proteina-Complexa is really great, and it would be useful to adapt it to the Apple Silicon Platform for testing by people who do not have access to top NVIDIA hardware, such as students.

For information, I succeeded in creating a working fork for Apple Silicon (MPS/Metal). It is currently HERE.

It runs in a Python 3.13 conda environment with PyTorch 2.11, jax-mps, and RF3 and tmol forks that I also adapted to Apple Silicon (thanks to Codex and Claude code!).

I can make a PR, though I understand it is not of interest to NVIDIA.

Florian

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing the linked Apple Silicon fork and its Python 3.13 conda environment, PyTorch 2.11, jax-mps, RF3, and tmol adaptations. Compare its changes with Proteina-Complexa, then validate the project on Apple Silicon; done means the supported workflow runs without requiring NVIDIA hardware.

Written by the indexing model from the issue text.

Assessment

Tech stack
python, pytorch
Domain
machine-learning, operating-systems
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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