MetOffice / MetOffice/lfric_apps

`lfric_atm` crashes when running with Genoa craylibs

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#621 0 comments 0 reactions 0 assignees View on GitHub

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bug
Dominant language
Fortran
Stars
31
Forks
118
Avg merge
2d 4h
Merged PRs (30d)
8

Description

### Version

main

### Are there any linked Issues or Pull Requests?

#622

### What happened?

When trying to run `lfric_atm` using Genoa craylibs (`craype-x86-genoa` and `mo-craylibs-genoa/1.0`) there is a segmentation fault.

### Relevant log output

```shell
ATP analysis is starting...

Processes died with the following statuses:
<0-756,758-3946,3948-3974,3976-4850> Reason: '' Address: 0x1457f57235d7 Assertion: ''
(2 more threads in atpMergedBT_line.dot)
<757,3947,3975> Reason: 'SIGSEGV /SEGV_MAPERR' Address: 0xfffffffc054d45c0 Assertion: ''
<3975> #1 qsat_real64_1d$qsat_mod_ + 0x444
<3947> #1 qsat_real64_1d$qsat_mod_ + 0x324
<757> #1 qsat_real64_1d$qsat_mod_ + 0x57d
<757,3947,3975> #0 shallow_conv_6a$shallow_conv_6a_mod_ + 0xb18a
(1 more thread in atpMergedBT_line.dot)
```

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reproducing the lfric_atm run with craype-x86-genoa and mo-craylibs-genoa/1.0. Then inspect the qsat_real64_1d and shallow_conv_6a stack entries shown in the crash log; done means the Genoa craylibs run completes without the segmentation fault.

Written by the indexing model from the issue text.

Assessment

Tech stack
fortran
Domain
hpc
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Quiet
Clarity
Needs clarification
Newbie friendliness
45/100

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