Merck / Merck/deepbgc

Hmmer and Prodigal Package Access Problem

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Description

Anacaonda3
Python 3.7
Windows 10

In the process of installing deepBGC get an error message that the package can't be installed because hmmer and Prodigal are not accessible. Any clarification and guidance much appreciated

deepBGC_package_load_error

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First steps

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  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

No source file or test is identified. Start by reproducing the deepBGC installation on Windows 10 with Anaconda3 and Python 3.7, then inspect the reported hmmer and Prodigal package-access error. Done means both dependencies are accessible and the deepBGC installation completes successfully.

Written by the indexing model from the issue text.

Assessment

Tech stack
anaconda, python
Domain
bioinformatics
Issue type
Bug
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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