Merck / Merck/deepbgc

Installing 0.1.26 with Anaconda

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Description

I'm getting a failure to install deepbgc 0.1.26 using Anaconda. Fails with no available version of matplotlib-base==2.2.3

Is that version really a hard requirement?

`------

[9/9] RUN conda create -n dbgcenv -c bioconda -y deepbgc=0.1.26:
#13 0.684 Collecting package metadata (current_repodata.json): ...working... done
#13 3.771 Solving environment: ...working... failed with repodata from current_repodata.json, will retry with next repodata source.
#13 4.193 Collecting package metadata (repodata.json): ...working... done
#13 14.16 Solving environment: ...working...
#13 23.31 Found conflicts! Looking for incompatible packages.
#13 23.31 This can take several minutes. Press CTRL-C to abort.
#13 23.31 failed
#13 23.31
#13 23.31 PackagesNotFoundError: The following packages are not available from current channels:
#13 23.31
#13 23.31 - matplotlib-base==2.2.3
#13 23.31
#13 23.31 Current channels:
#13 23.31
#13 23.31 - https://conda.anaconda.org/bioconda/linux-64
#13 23.31 - https://conda.anaconda.org/bioconda/noarch
#13 23.31 - https://repo.anaconda.com/pkgs/main/linux-64
#13 23.31 - https://repo.anaconda.com/pkgs/main/noarch
#13 23.31 - https://repo.anaconda.com/pkgs/r/linux-64
#13 23.31 - https://repo.anaconda.com/pkgs/r/noarch
#13 23.31
#13 23.31 To search for alternate channels that may provide the conda package you're
#13 23.31 looking for, navigate to
#13 23.31
#13 23.31 https://anaconda.org
#13 23.31
#13 23.31 and use the search bar at the top of the page.
`

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First steps

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  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reproducing the reported conda create -n dbgcenv -c bioconda -y deepbgc=0.1.26 command and inspecting the package metadata for the matplotlib-base==2.2.3 dependency. Done means the 0.1.26 environment can be created from the listed channels without requesting an unavailable package version.

Written by the indexing model from the issue text.

Assessment

Tech stack
anaconda, matplotlib, python
Domain
build-system
Issue type
Bug
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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