Installing 0.1.26 with Anaconda
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Description
I'm getting a failure to install deepbgc 0.1.26 using Anaconda. Fails with no available version of matplotlib-base==2.2.3
Is that version really a hard requirement?
`------
[9/9] RUN conda create -n dbgcenv -c bioconda -y deepbgc=0.1.26:
#13 0.684 Collecting package metadata (current_repodata.json): ...working... done
#13 3.771 Solving environment: ...working... failed with repodata from current_repodata.json, will retry with next repodata source.
#13 4.193 Collecting package metadata (repodata.json): ...working... done
#13 14.16 Solving environment: ...working...
#13 23.31 Found conflicts! Looking for incompatible packages.
#13 23.31 This can take several minutes. Press CTRL-C to abort.
#13 23.31 failed
#13 23.31
#13 23.31 PackagesNotFoundError: The following packages are not available from current channels:
#13 23.31
#13 23.31 - matplotlib-base==2.2.3
#13 23.31
#13 23.31 Current channels:
#13 23.31
#13 23.31 - https://conda.anaconda.org/bioconda/linux-64
#13 23.31 - https://conda.anaconda.org/bioconda/noarch
#13 23.31 - https://repo.anaconda.com/pkgs/main/linux-64
#13 23.31 - https://repo.anaconda.com/pkgs/main/noarch
#13 23.31 - https://repo.anaconda.com/pkgs/r/linux-64
#13 23.31 - https://repo.anaconda.com/pkgs/r/noarch
#13 23.31
#13 23.31 To search for alternate channels that may provide the conda package you're
#13 23.31 looking for, navigate to
#13 23.31
#13 23.31 https://anaconda.org
#13 23.31
#13 23.31 and use the search bar at the top of the page.
`
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reproducing the reported conda create -n dbgcenv -c bioconda -y deepbgc=0.1.26 command and inspecting the package metadata for the matplotlib-base==2.2.3 dependency. Done means the 0.1.26 environment can be created from the listed channels without requesting an unavailable package version.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- anaconda, matplotlib, python
- Domain
- build-system
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100