Retrain on MIBiG 2.0
Open
Nobody has claimed this yet.
enhancement
- Dominant language
- Jupyter Notebook
- Stars
- 161
- Forks
- 29
- PR merge metrics
- No merged PRs in 30d
Description
Our current model is trained on MIBiG 1.4, we can retrain (and validate) the model.
We can also demonstrate how our current model performs on the newly added BGCs.
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
The issue names no files, tests, or entry points. Start by locating the current model training and validation workflow, then identify how MIBiG 2.0 data and newly added BGCs are evaluated; done means a retrained model, validation results, and a performance demonstration on the new BGCs.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- jupyter-notebook, python
- Domain
- bioinformatics, machine-learning
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100