Materials-Consortia / Materials-Consortia/optimade-python-tools

Add optimisation for `included` references for MongoDB

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Dominant language
Python
Stars
91
Forks
54
PR merge metrics
No merged PRs in 30d

Description

In the many-to-many case of relationships between entries (e.g., every structure has a distinct reference), our way of resolving relationships can be quite slow (we currently hook into the OPTIMADE ID filter and just do a bit chained OR). Ideally, this is something that should be handled directly by join queries in the backend. For MongoDB, this should be straight forward but will need some profiling on "real" databases first.

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

No files, tests, or entry points are named. Start by profiling the current OPTIMADE ID filter and chained OR relationship resolution on realistic MongoDB databases, then compare it with direct backend join queries; done means included references are resolved with a validated MongoDB optimization.

Written by the indexing model from the issue text.

Assessment

Tech stack
mongodb, python
Domain
backend-api-design, databases
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
35/100

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