MIMIC-III : outpatient information
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Description
Prerequisites
- Put an X between the brackets on this line if you have done all of the following:
- Checked the online documentation: https://mimic.mit.edu/
- Checked that your issue isn't already addressed: https://github.com/MIT-LCP/mimic-code/issues?utf8=%E2%9C%93&q=
Description
Description of the issue, including:
Hello, I'm curious for getting soma data from MIMIC-III.
How would I get some data of 'outpatient' from LABEVENTS.csv table?
For example, there are some lab event or lab results data from LABEVENTS.csv table.
and as it says in this document, it's outpatient data for only lab test if the row doesn't have HADM_ID.
So, this is what I want.
- For a patient, can we know when a patient has visited the hospital for the lab test?
- It has only
CHARTTIMEcolumn fromLABEVENTS.csv. I guess I can't get which date. - So, I would like to use this information with 'how many the patients have visited in the hospital for the lab test as a outpatient'.
Thank you
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start with the linked MIMIC-III LABEVENTS documentation and the LABEVENTS.csv table, focusing on rows without HADM_ID and the CHARTTIME field. Determine whether the repository documents a way to identify outpatient lab visits and count them per patient; done means the issue has a documented, source-supported answer.
Written by the indexing model from the issue text.
Assessment
- Domain
- data, databases
- Issue type
- Documentation
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100