ME-ICA / ME-ICA/open-multi-echo-data

Multi-echo simultaneous multislice fMRI dataset: Effect of acquisition parameters on fMRI data

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3-echo 3T datasets physio
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Description

Location

https://openneuro.org/datasets/ds004499

Basic Info

Three echoes with concurrent physio, but they varied TR, MB factor, number of scans, and flip angle.

The task is a combined flashing checkerboard-button pressing block design.

Derivatives

  • afni_proc.py
  • fMRIPrep

Contributor guide

No contributing guide indexed for this repository

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start with the dataset at https://openneuro.org/datasets/ds004499 and review its acquisition parameters, task design, and concurrent physiological recordings. Determine how to run afni_proc.py and fMRIPrep for this dataset; the work is done when both derivative outputs are generated and documented in the checklist.

Written by the indexing model from the issue text.

Assessment

Domain
data
Issue type
Feature
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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