Lucy-Forrest-Lab / Lucy-Forrest-Lab/HDXer
Assertion errors on pytest
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Description
Hi,
I tried setting up HDXer on an Ubuntu 22.04.5 LTS using your instructions on GitHub (https://github.com/Lucy-Forrest-Lab/HDXer [github.com]), but ran into some errors when running 'pytest -v' with 3 failed tests.
============================================== short test summary info ==============================================
FAILED HDXer/tests/test_reweighting.py::test_run_no_reweight_1 - assert False
FAILED HDXer/tests/test_reweighting_functions.py::test_calc_trial_dfracs - assert 0.10264717813333453 == 0.1026471781333345
FAILED HDXer/tests/test_reweighting_functions.py::test_calc_work - assert 2.2941380349223457 == 2.294138034922346
=========================================== 3 failed, 15 passed in 56.72s ===========================================
They all look to be assertion errors. I have attached a log file with all commands typed, the test initiation and output. I have also attached a list of all dependencies installed in the Conda environment (installed using suggested install instructions on GitHub).
I would appreciate any and all help.
Best wishes,
G
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First steps
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Research direction
Start by running pytest -v and reviewing HDXer/tests/test_reweighting.py::test_run_no_reweight_1, HDXer/tests/test_reweighting_functions.py::test_calc_trial_dfracs, and test_calc_work alongside the attached logs and dependency list. Determine why these assertions fail in the reported Ubuntu and Conda environment; done means the failing tests are addressed and the suite passes.
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Assessment
- Tech stack
- python
- Domain
- testing-qa
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 38/100