LepistaBioinformatics / LepistaBioinformatics/blutils
Parameter maxTargetSeqs not delivered to blast command
Open
Nobody has claimed this yet.
- Dominant language
- Rust
- Stars
- 4
- Forks
- 0
- PR merge metrics
- No merged PRs in 30d
Description
The CLI parameter maxTargetSeqs should be set through the terminal command but it are not being delivered to the blast proc adapter.
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start at the CLI handling for the maxTargetSeqs parameter and trace how it is passed to the BLAST process adapter. Verify the terminal value reaches the BLAST command, then confirm the adapter receives and uses it correctly.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- rust
- Domain
- cli
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 45/100