Rootfinding based events
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- Java
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Description
In NeuroML, we do
<StateVariable name="spiking" dimension="none"/>
<OnCondition test="v .gt. thresh .and. spiking .lt. 0.5">
<StateAssignment variable="spiking" value="1"/>
<EventOut port="spike"/>
</OnCondition>
<OnCondition test="v .lt. thresh">
<StateAssignment variable="spiking" value="0"/>
</OnCondition>
to detect spikes. This involves the creation of a new state variable, and some "ad hoc" logic. This degree of "imperativeness" seems to go against the declarative philosophy of NeuroML/LEMS.
I would suggest defining and detecting events as zero-crossings of state functions in a given direction, i.e., we would just need to say something like
<OnCondition test="v - thresh" direction="increasing">
<EventOut port="spike"/>
</OnCondition>
this would simplify the component, but jLEMS would then need to store history in order to detect events. @robertcannon, would that require drastic changes to the interpreter?
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Research direction
Start by reading the jLEMS interpreter's handling of NeuroML OnCondition events and determine how event conditions are currently evaluated. Trace what changes would be required to detect zero-crossings and retain the needed history. Done means the scope and impact of supporting directional rootfinding events are documented clearly enough for implementation.
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Assessment
- Tech stack
- java
- Domain
- compilers
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 25/100