JuliaGraphs / JuliaGraphs/GraphIO.jl
feature request: newick format
Open
Nobody has claimed this yet.
- Dominant language
- Julia
- Stars
- 62
- Forks
- 30
- PR merge metrics
- No merged PRs in 30d
Description
Do you, or would you, support reading graphs specified in a Newick format? https://en.wikipedia.org/wiki/Newick_format ? Perhaps in the context of MetaGraphs (as the Newick format contains some metadata)?
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing the Newick format specification linked in the issue and the repository's existing graph-format readers. Determine the intended support for Newick metadata and MetaGraphs, then verify that supported Newick input can be read into the relevant graph representation with tests covering the agreed scope.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- julia
- Domain
- data
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 45/100