JuliaAI / JuliaAI/ScientificTypes.jl
tuple/table ambiguity
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- Dominant language
- Julia
- Stars
- 98
- Forks
- 7
- PR merge metrics
- No merged PRs in 30d
Description
The scitype of a tuple is intended to be the Tuple of the element scitypes. For example:
julia> scitype((1.0, 4))
Tuple{Continuous, Count}
By this logic, if I create a 1-tuple with a table t as it's single element, then this tuple should have Tuple{scitype(t)}. But this isn't always the case:
t = (x=[1, 2], y=["a", "b"])
julia> scitype(t)
Table{Union{AbstractVector{Count}, AbstractVector{Textual}}}
julia> scitype((t,))
Table{Union{AbstractVector{AbstractVector{Count}}, AbstractVector{AbstractVector{Textual}}}}
The problem is that (t, ) is also a table (with one row):
julia> schema((t,))
┌───────┬─────────────────────────┬────────────────┐
│ names │ scitypes │ types │
├───────┼─────────────────────────┼────────────────┤
│ x │ AbstractVector{Count} │ Vector{Int64} │
│ y │ AbstractVector{Textual} │ Vector{String} │
└───────┴─────────────────────────┴────────────────┘
This is pretty awful 😢 . For example it makes it tricky, in MLJBase, to use the fit_data_scitype of models, to check compatibility of a model with data, as in https://github.com/JuliaAI/MLJBase.jl/pull/731 . That is, the test scitype(data) <: fit_data_scitype(model) where data is the tuple of data arguments, is not reliable.
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
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Research direction
Reproduce the scitype((t,)) and schema((t,)) examples from the issue, then trace the scitype and schema entry points that classify tuples and tables. Compare the result with the intended Tuple{scitype(t)} behavior and the MLJBase compatibility use case; done requires an agreed rule for resolving this ambiguity and corresponding validation.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- julia
- Domain
- machine-learning
- Issue type
- Bug
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 35/100