ISA-TAB writer and column order for 'Normalisation Name', 'Data Transformation Name', 'Derived Data File'
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- Dominant language
- Python
- Stars
- 48
- Forks
- 42
- PR merge metrics
- No merged PRs in 30d
Description
checking the output of comics.ipynb, the handling of Data Node by ISA-Tab writer seems to mishandle the field order.
TODO:
check process sequence invocation.
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by running or inspecting comics.ipynb and tracing the ISA-Tab writer's handling of Data Node fields and process sequence invocation. Compare the generated output with the expected order for “Normalisation Name”, “Data Transformation Name”, and “Derived Data File”; done means the writer emits these columns in the correct sequence.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100