Feature Request/Idea: Export of metadata for SRA/GenBank submission
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- Dominant language
- Java
- Stars
- 1.1k
- Forks
- 564
- Avg merge
- 2d 2h
- Merged PRs (30d)
- 29
Description
Overview of the Feature Request
Possibility of exporting a dataset metadata in a format for NCBI's Genbank/SRA
What kind of user is the feature intended for?
(Example users roles: API User, Curator, Depositor, Guest, Superuser, Sysadmin)
This feature is intended for Depositors
What inspired the request?
It is dificult to convince NGS data owners to deposit their data in dataverses, since they always have to deposit in NCBI in order to publish, this feature would eliminate the need to fill metadata twice, and facilitate the whole process
What existing behavior do you want changed?
A button to export metadata, or even a button to directly open a ncbi submission page with the metadate pre-filled from an existing dataset.
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Review NCBI GenBank/SRA submission metadata requirements and Dataverse’s existing dataset export flows. Determine whether the scope is a metadata file export, a prefilled submission page, or both, and define the required field mapping and completion criteria. The issue names no implementation files or tests.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- java
- Domain
- data
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 30/100