INCATools / INCATools/term-expando

Allow other expansion sources: services, kgx

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Python
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Description

currently an ontology file can be used as expansion source (closures, id<->name/syns, etc)

we should also allow

- a kgx file (nodes for id/names, edges for closures or equivalencies)
- services
- biothings
- sri normalizer (cc @cbizon)

for the services, implement caching to avoid hammering

Contributor guide

No contributing guide indexed for this repository

Research direction

No files, tests, or entry points are named. Start by locating the existing ontology-file expansion source, then trace how sources are selected and cached; done means KGX files and the Biothings and SRI Normalizer services can provide expansions without repeated service requests.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
cli
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
25/100

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