INCATools / INCATools/ontology-development-kit
Include uv
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- Dominant language
- Dockerfile
- Stars
- 375
- Forks
- 69
- Avg merge
- 3d 5h
- Merged PRs (30d)
- 7
Description
I want to call a custom SSSOM-processing workflow I implemented in sssom-pydantic from a makefile in an ODK repository.
I don't want to have a discussion about include sssom-pydantic in ODK right now.
Instead, I think that adding uv into the ODK full docker container would enable me to incorporate any custom functionality I would like into my ODK repository's Makefile.
Or, if it's the case that the goal of ODK is to disallow the usage of non-ordained dependencies, then it would be helpful if that were made more clear. By ordained, I mean dependencies listed in:
- https://github.com/INCATools/ontology-development-kit/blob/master/Dockerfile
- https://github.com/INCATools/ontology-development-kit/blob/master/python-requirements.txt
- https://github.com/INCATools/odkcore/blob/4cebc444ee7eb8e7bce8116f64901fa748c59864/pyproject.toml#L66-L86
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by reviewing the full-container setup in Dockerfile, then compare its dependencies with python-requirements.txt and the referenced dependency section in pyproject.toml. Add uv to the full Docker image and verify that the container can support a Makefile workflow using it; also confirm the intended dependency policy is clear from the resulting setup.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- docker, python
- Domain
- devops, tooling
- Issue type
- Feature
- Difficulty
- 2/5
- Estimated time
- 1-3 hours
- Activity status
- Active
- Clarity
- Mostly clear
- Newbie friendliness
- 72/100