INCATools / INCATools/dosdp-tools

Help figuring out how to run dosdp-tools

Open
#338 7 comments 0 reactions 0 assignees View on GitHub
Dominant language
Scala
Stars
33
Forks
5
PR merge metrics
No merged PRs in 30d

Description

I installed per the instructions and added the executable to my path. If I am in `target/universal/stage/bin/` and type `dosdp-tools -h` I get a reasonable help message, but if I am anywhere else, I get a help message that is not specific to the tool. When I try to run the tool, I get errors like `Unrecognized argument: --obo-prefixes`.

I guess this has something to do with dependencies, but it is beyond my skill to figure out what, even with google.

Any suggestion, @balhoff?

Contributor guide

No contributing guide indexed for this repository

Research direction

Start with the installation instructions and compare running `dosdp-tools -h` from `target/universal/stage/bin/` with running it elsewhere on PATH. Reproduce the `Unrecognized argument: --obo-prefixes` error and trace the staged executable's dependency or launch behavior. Done means the installed command shows the tool-specific help and accepts the documented option from outside the staging directory.

Written by the indexing model from the issue text.

Assessment

Tech stack
scala
Domain
cli, tooling
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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