HDF5 test configuration with Rocky9 fails
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Description
The following tests FAILED:
[0;31m615 - H5IMPORT-STR-H5DMP_CMP (Failed)[0;0m
[0;31m794 - H5REPACK-deflate_file (Failed)[0;0m
[0;31m795 - H5REPACK-deflate_file_DFF (Failed)[0;0m
Rocky9, cmake 3.26.5 hdf 1.14.6( i did not find 2-x.x)
Could someone do me a favor.
The following was the related part of log:
*********************************************************************************
[HANDLER_OUTPUT]
Start 615: H5IMPORT-STR-H5DMP_CMP
[HANDLER_VERBOSE_OUTPUT]
615: Test command: /usr/bin/cmake "-D" "TEST_EMULATOR=" "-D" "TEST_PROGRAM=/opt/myhdf/build/bin/h5dump" "-D" "TEST_ARGS:STRING=testfiles/txtstr.h5" "-D" "TEST_FOLDER=/opt/myhdf/build/tools/test/h5import" "-D" "TEST_OUTPUT=txtstr.h5.out" "-D" "TEST_EXPECT=0" "-D" "TEST_FILTER=(^(HDF5)[^
]*)" "-D" "TEST_REFERENCE=txtstr.h5.new" "-P" "/opt/myhdf/hdf5-1.14.6/config/cmake/runTest.cmake"
615: Working Directory: /opt/myhdf/build/tools/test/h5import
615: Test timeout computed to be: 1200
2492: -- COMMAND: /opt/myhdf/build/bin/H5_cpp_ex_create
2492: -- COMMAND Result: 0
2492: -- COMMAND Error:
2492:
2492: -- /opt/myhdf/build/bin/H5_cpp_ex_create Passed
2502: -- COMMAND: /opt/myhdf/build/bin/H5_cpp_ex_h5tutr_crtdat
2502: -- COMMAND Result: 0
2502: -- COMMAND Error:
2502:
2502: -- /opt/myhdf/build/bin/H5_cpp_ex_h5tutr_crtdat Passed
[HANDLER_OUTPUT]
75/2516 Test #2492: H5_cpp_ex_create ...........................................................
Passed 0.02 sec
[HANDLER_VERBOSE_OUTPUT]
test 625
[HANDLER_OUTPUT]
Start 625: H5IMPORT-BINARY_I8_EOF-H5DMP_CMP
[HANDLER_VERBOSE_OUTPUT]
625: Test command: /usr/bin/cmake "-D" "TEST_EMULATOR=" "-D" "TEST_PROGRAM=/opt/myhdf/build/bin/h5dump" "-D" "TEST_ARGS:STRING=testfiles/binin8w.h5" "-D" "TEST_FOLDER=/opt/myhdf/build/tools/test/h5import" "-D" "TEST_OUTPUT=binin8w.h5.out" "-D" "TEST_EXPECT=0" "-D" "TEST_FILTER=(^(HDF5)[^
]*)" "-D" "TEST_REFERENCE=binin8w.h5.new" "-P" "/opt/myhdf/hdf5-1.14.6/config/cmake/runTest.cmake"
625: Working Directory: /opt/myhdf/build/tools/test/h5import
625: Test timeout computed to be: 1200
[HANDLER_OUTPUT]
76/2516 Test #2502: H5_cpp_ex_h5tutr_crtdat ....................................................
Passed 0.02 sec
[HANDLER_VERBOSE_OUTPUT]
test 1025
[HANDLER_OUTPUT]
Start 1025: H5REPACK_META-meta_short-clear-objects
[HANDLER_VERBOSE_OUTPUT]
1025: Test command: /usr/bin/cmake "-E" "remove" "testfiles/out-meta_short_N.meta_short.h5" "testfiles/out-meta_short_M.meta_short.h5"
1025: Working Directory: /opt/myhdf/build/tools/test/h5repack
1025: Test timeout computed to be: 1200
2258: -- COMMAND: /opt/myhdf/build/bin/h5watch WATCH.h5/DSET_NONE
2258: -- COMMAND Result: 1
2258: -- COMMAND Error:
2258: -- Passed: The output of /opt/myhdf/build/bin/h5watch matched
[HANDLER_OUTPUT]
77/2516 Test #2258: H5WATCH_ARGS-h5watch-w-err-dset-none .......................................
Passed 0.02 sec
[HANDLER_VERBOSE_OUTPUT]
test 2259
[HANDLER_OUTPUT]
Start 2259: H5WATCH_ARGS-h5watch-w-err-dset-nomax
[HANDLER_VERBOSE_OUTPUT]
2259: Test command: /usr/bin/cmake "-D" "TEST_EMULATOR=" "-D" "TEST_PROGRAM=/opt/myhdf/build/bin/h5watch" "-D" "TEST_ARGS:STRING=WATCH.h5/DSET_NOMAX" "-D" "TEST_FOLDER=/opt/myhdf/build/hl/tools/h5watch/testfiles" "-D" "TEST_OUTPUT=w-err-dset-nomax.out" "-D" "TEST_EXPECT=1" "-D" "TEST_REFERENCE=w-err-dset-nomax.mty" "-D" "TEST_ERRREF=h5watch error" "-D" "TEST_SKIP_COMPARE=true" "-P" "/opt/myhdf/hdf5-1.14.6/config/cmake/grepTest.cmake"
2259: Working Directory: /opt/myhdf/build/hl/tools/h5watch
2259: Test timeout computed to be: 1200
392: -- COMMAND: /opt/myhdf/build/bin/h5clear -s;junk.h5
392: -- COMMAND Result: 1
392: -- COMMAND Error:
392: -- Passed: The output of /opt/myhdf/build/bin/h5clear matched
[HANDLER_OUTPUT]
78/2516 Test #392: H5CLEAR_CMP-h5clr_open_fail_s ..............................................
Passed 0.02 sec
[HANDLER_VERBOSE_OUTPUT]
test 1032
[HANDLER_OUTPUT]
Start 1032: H5REPACK_META-meta_long-clear-objects
[HANDLER_VERBOSE_OUTPUT]
1032: Test command: /usr/bin/cmake "-E" "remove" "testfiles/out-meta_long_N.meta_long.h5" "testfiles/out-meta_long_M.meta_long.h5"
1032: Working Directory: /opt/myhdf/build/tools/test/h5repack
1032: Test timeout computed to be: 1200
555: -- COMMAND: /opt/myhdf/build/bin/h5dump testfiles/binfp64.h5
555: -- COMMAND Result: 0
555: -- COMMAND Error:
555: -- TEST_FILTER: (^(HDF5)[^
555: ]*) TEST_FILTER_REPLACE:
555: -- COMPARE Result: 0
555: -- /opt/myhdf/build/bin/h5dump Passed
565: -- COMMAND: /opt/myhdf/build/bin/h5dump testfiles/binin8.h5
565: -- COMMAND Result: 0
565: -- COMMAND Error:
565: -- TEST_FILTER: (^(HDF5)[^
565: ]*) TEST_FILTER_REPLACE:
565: -- COMPARE Result: 0
565: -- /opt/myhdf/build/bin/h5dump Passed
575: -- COMMAND: /opt/myhdf/build/bin/h5dump testfiles/binin16.h5
575: -- COMMAND Result: 0
575: -- COMMAND Error:
575: -- TEST_FILTER: (^(HDF5)[^
575: ]*) TEST_FILTER_REPLACE:
575: -- COMPARE Result: 0
575: -- /opt/myhdf/build/bin/h5dump Passed
2290: -- COMMAND: /opt/myhdf/build/bin/H5_tutr_h5_crtgrpar
2290: -- COMMAND Result: 0
2290: -- COMMAND Error:
2290:
595: -- COMMAND: /opt/myhdf/build/bin/h5dump testfiles/binuin16.h5
595: -- COMMAND Result: 0
595: -- COMMAND Error:
595: -- TEST_FILTER: (^(HDF5)[^
595: ]*) TEST_FILTER_REPLACE:
585: -- COMMAND: /opt/myhdf/build/bin/h5dump testfiles/binin32.h5
585: -- COMMAND Result: 0
585: -- COMMAND Error:
585: -- TEST_FILTER: (^(HDF5)[^
585: ]*) TEST_FILTER_REPLACE:
605: -- COMMAND: /opt/myhdf/build/bin/h5dump testfiles/binuin32.h5
605: -- COMMAND Result: 0
615: -- COMMAND: /opt/myhdf/build/bin/h5dump testfiles/txtstr.h5
625: -- COMMAND: /opt/myhdf/build/bin/h5dump testfiles/binin8w.h5
[HANDLER_OUTPUT]
79/2516 Test #555: H5IMPORT-BINARY_F64-H5DMP_CMP ..............................................
Passed 0.02 sec
[HANDLER_VERBOSE_OUTPUT]
test 1085
[HANDLER_OUTPUT]
Start 1085: H5REPACK_EXTERNAL-ext_f32le
[HANDLER_VERBOSE_OUTPUT]
1085: Test command: /opt/myhdf/build/bin/h5repack "--enable-error-stack" "-l" "CONTI" "/opt/myhdf/build/tools/test/h5repack/testfiles/h5repack_f32le_ex.h5" "/opt/myhdf/build/tools/test/h5repack/testfiles/h5repack_f32le_rp.h5"
1085: Working Directory: /opt/myhdf/build/tools/test/h5repack/testfiles
1085: Test timeout computed to be: 1200
[HANDLER_OUTPUT]
80/2516 Test #565: H5IMPORT-BINARY_I8-H5DMP_CMP ...............................................
Passed 0.02 sec
[HANDLER_VERBOSE_OUTPUT]
test 1095
[HANDLER_OUTPUT]
Start 1095: H5REPACK_EXTERNAL-ext_int32le_1d
[HANDLER_VERBOSE_OUTPUT]
1095: Test command: /opt/myhdf/build/bin/h5repack "--enable-error-stack" "-l" "CONTI" "/opt/myhdf/build/tools/test/h5repack/testfiles/h5repack_int32le_1d_ex.h5" "/opt/myhdf/build/tools/test/h5repack/testfiles/h5repack_int32le_1d_rp.h5"
1095: Working Directory: /opt/myhdf/build/tools/test/h5repack/testfiles
1095: Test timeout computed to be: 1200
[HANDLER_OUTPUT]
81/2516 Test #575: H5IMPORT-BINARY_I16-H5DMP_CMP ..............................................
Passed 0.02 sec
[HANDLER_VERBOSE_OUTPUT]
test 1105
[HANDLER_OUTPUT]
Start 1105: H5REPACK_EXTERNAL-ext_int32le_2d
[HANDLER_VERBOSE_OUTPUT]
1105: Test command: /opt/myhdf/build/bin/h5repack "--enable-error-stack" "-l" "CONTI" "/opt/myhdf/build/tools/test/h5repack/testfiles/h5repack_int32le_2d_ex.h5" "/opt/myhdf/build/tools/test/h5repack/testfiles/h5repack_int32le_2d_rp.h5"
1105: Working Directory: /opt/myhdf/build/tools/test/h5repack/testfiles
1105: Test timeout computed to be: 1200
605: -- COMMAND Error:
605: -- TEST_FILTER: (^(HDF5)[^
605: ]*) TEST_FILTER_REPLACE:
615: -- COMMAND Result: 0
615: -- COMMAND Error:
615: -- TEST_FILTER: (^(HDF5)[^
615: ]*) TEST_FILTER_REPLACE:
625: -- COMMAND Result: 0
625: -- COMMAND Error:
625: -- TEST_FILTER: (^(HDF5)[^
625: ]*) TEST_FILTER_REPLACE:
[HANDLER_OUTPUT]
82/2516 Test #1025: H5REPACK_META-meta_short-clear-objects .....................................
Passed 0.01 sec
[HANDLER_VERBOSE_OUTPUT]
test 1115
[HANDLER_OUTPUT]
Start 1115: H5REPACK_EXTERNAL-ext_int32le_3d
[HANDLER_VERBOSE_OUTPUT]
1115: Test command: /opt/myhdf/build/bin/h5repack "--enable-error-stack" "-l" "CONTI" "/opt/myhdf/build/tools/test/h5repack/testfiles/h5repack_int32le_3d_ex.h5" "/opt/myhdf/build/tools/test/h5repack/testfiles/h5repack_int32le_3d_rp.h5"
1115: Working Directory: /opt/myhdf/build/tools/test/h5repack/testfiles
1115: Test timeout computed to be: 1200
2290: -- /opt/myhdf/build/bin/H5_tutr_h5_crtgrpar Passed
[HANDLER_OUTPUT]
83/2516 Test #2290: H5_tutr_h5_crtgrpar ........................................................
Passed 0.03 sec
[HANDLER_VERBOSE_OUTPUT]
test 2291
[HANDLER_OUTPUT]
Start 2291: H5_tutr_h5_crtgrpd
[HANDLER_VERBOSE_OUTPUT]
2291: Test command: /usr/bin/cmake "-D" "TEST_EMULATOR=" "-D" "TEST_PROGRAM=/opt/myhdf/build/bin/H5_tutr_h5_crtgrpd" "-D" "TEST_ARGS:STRING=" "-D" "TEST_FOLDER=/opt/myhdf/build/HDF5Examples/C/TUTR" "-D" "TEST_EXPECT=0" "-D" "TEST_SKIP_COMPARE=TRUE" "-D" "TEST_OUTPUT=h5_crtgrpd.out" "-D" "TEST_LIBRARY_DIRECTORY=" "-P" "/opt/myhdf/hdf5-1.14.6/config/cmake/runTest.cmake"
2291: Working Directory: /opt/myhdf/build/HDF5Examples/C/TUTR
2291: Test timeout computed to be: 1200
2259: -- COMMAND: /opt/myhdf/build/bin/h5watch WATCH.h5/DSET_NOMAX
[HANDLER_OUTPUT]
84/2516 Test #1085: H5REPACK_EXTERNAL-ext_f32le ................................................
Passed 0.01 sec
[HANDLER_VERBOSE_OUTPUT]
test 1125
[HANDLER_OUTPUT]
Start 1125: H5REPACK_EXTERNAL-ext_uint8be
[HANDLER_VERBOSE_OUTPUT]
1125: Test command: /opt/myhdf/build/bin/h5repack "--enable-error-stack" "-l" "CONTI" "/opt/myhdf/build/tools/test/h5repack/testfiles/h5repack_uint8be_ex.h5" "/opt/myhdf/build/tools/test/h5repack/testfiles/h5repack_uint8be_rp.h5"
1125: Working Directory: /opt/myhdf/build/tools/test/h5repack/testfiles
1125: Test timeout computed to be: 1200
605: -- COMPARE Result: 0
605: -- /opt/myhdf/build/bin/h5dump Passed
2259: -- COMMAND Result: 1
2259: -- COMMAND Error:
2259: -- Passed: The output of /opt/myhdf/build/bin/h5watch matched
[HANDLER_OUTPUT]
85/2516 Test #2259: H5WATCH_ARGS-h5watch-w-err-dset-nomax ......................................
Passed 0.01 sec
[HANDLER_VERBOSE_OUTPUT]
test 2260
[HANDLER_OUTPUT]
Start 2260: H5WATCH_ARGS-h5watch-w-err-file
[HANDLER_VERBOSE_OUTPUT]
2260: Test command: /usr/bin/cmake "-D" "TEST_EMULATOR=" "-D" "TEST_PROGRAM=/opt/myhdf/build/bin/h5watch" "-D" "TEST_ARGS:STRING=../WATCH.h5/DSET_CMPD" "-D" "TEST_FOLDER=/opt/myhdf/build/hl/tools/h5watch/testfiles" "-D" "TEST_OUTPUT=w-err-file.out" "-D" "TEST_EXPECT=1" "-D" "TEST_REFERENCE=w-err-file.mty" "-D" "TEST_ERRREF=h5watch error" "-D" "TEST_SKIP_COMPARE=true" "-P" "/opt/myhdf/hdf5-1.14.6/config/cmake/grepTest.cmake"
2260: Working Directory: /opt/myhdf/build/hl/tools/h5watch
2260: Test timeout computed to be: 1200
585: -- COMPARE Result: 0
585: -- /opt/myhdf/build/bin/h5dump Passed
[HANDLER_OUTPUT]
86/2516 Test #585: H5IMPORT-BINARY_I32-H5DMP_CMP ..............................................
Passed 0.03 sec
[HANDLER_VERBOSE_OUTPUT]
test 1252
[HANDLER_OUTPUT]
Start 1252: H5JAM-N_ta_u10_NONE-SETUP
[HANDLER_VERBOSE_OUTPUT]
1252: Test command: /usr/bin/cmake "-E" "copy_if_different" "testfiles/tall.h5" "ta6.h5"
1252: Working Directory: /opt/myhdf/build/tools/test/h5jam
1252: Test timeout computed to be: 1200
[HANDLER_OUTPUT]
87/2516 Test #1095: H5REPACK_EXTERNAL-ext_int32le_1d ...........................................
Passed 0.01 sec
[HANDLER_VERBOSE_OUTPUT]
test 1260
[HANDLER_OUTPUT]
Start 1260: H5JAM-N_ta_u511_NONE-SETUP
[HANDLER_VERBOSE_OUTPUT]
1260: Test command: /usr/bin/cmake "-E" "copy_if_different" "testfiles/tall.h5" "ta7.h5"
1260: Working Directory: /opt/myhdf/build/tools/test/h5jam
1260: Test timeout computed to be: 1200
595: -- COMPARE Result: 0
595: -- /opt/myhdf/build/bin/h5dump Passed
[HANDLER_OUTPUT]
88/2516 Test #595: H5IMPORT-BINARY_UI16-H5DMP_CMP .............................................
Passed 0.03 sec
[HANDLER_VERBOSE_OUTPUT]
test 1268
[HANDLER_OUTPUT]
Start 1268: H5JAM-N_ta_u512_NONE-SETUP
[HANDLER_VERBOSE_OUTPUT]
1268: Test command: /usr/bin/cmake "-E" "copy_if_different" "testfiles/tall.h5" "ta8.h5"
1268: Working Directory: /opt/myhdf/build/tools/test/h5jam
1268: Test timeout computed to be: 1200
[HANDLER_OUTPUT]
89/2516 Test #1032: H5REPACK_META-meta_long-clear-objects ......................................
Passed 0.01 sec
[HANDLER_VERBOSE_OUTPUT]
test 1276
[HANDLER_OUTPUT]
Start 1276: H5JAM-N_ta_u513_NONE-SETUP
[HANDLER_VERBOSE_OUTPUT]
1276: Test command: /usr/bin/cmake "-E" "copy_if_different" "testfiles/tall.h5" "ta9.h5"
1276: Working Directory: /opt/myhdf/build/tools/test/h5jam
1276: Test timeout computed to be: 1200
[HANDLER_OUTPUT]
90/2516 Test #1105: H5REPACK_EXTERNAL-ext_int32le_2d ...........................................
Passed 0.01 sec
[HANDLER_VERBOSE_OUTPUT]
test 1380
[HANDLER_OUTPUT]
Start 1380: H5JAM-N_twithub_u10_c_NONE-SETUP
[HANDLER_VERBOSE_OUTPUT]
1380: Test command: /usr/bin/cmake "-E" "copy_if_different" "testfiles/twithub.h5" "tay2.h5"
1380: Working Directory: /opt/myhdf/build/tools/test/h5jam
1380: Test timeout computed to be: 1200
[HANDLER_OUTPUT]
91/2516 Test #1115: H5REPACK_EXTERNAL-ext_int32le_3d ...........................................
Passed 0.01 sec
[HANDLER_VERBOSE_OUTPUT]
test 1388
[HANDLER_OUTPUT]
Start 1388: H5JAM-N_twithub_u511_c_NONE-SETUP
[HANDLER_VERBOSE_OUTPUT]
1388: Test command: /usr/bin/cmake "-E" "copy_if_different" "testfiles/twithub.h5" "tay3.h5"
1388: Working Directory: /opt/myhdf/build/tools/test/h5jam
1388: Test timeout computed to be: 1200
615: -- line = 12
615: ***ACTUAL: (0): " hello world", " hello world again"
615: ****REFER: (0): " hello world ", " hello world again "
615:
615: -- COMPARE Result: 1
615: CMake Error at /opt/myhdf/hdf5-1.14.6/config/cmake/runTest.cmake:302 (message):
615: Failed: The output of txtstr.h5.out did not match txtstr.h5.new
615:
615:
625: -- COMPARE Result: 0
625: -- /opt/myhdf/build/bin/h5dump Passed
2291: -- COMMAND: /opt/myhdf/build/bin/H5_tutr_h5_crtgrpd
2291: -- COMMAND Result: 0
2291: -- COMMAND Error:
2260: -- COMMAND: /opt/myhdf/build/bin/h5watch ../WATCH.h5/DSET_CMPD
[HANDLER_OUTPUT]
92/2516 Test #605: H5IMPORT-BINARY_UI32-H5DMP_CMP .............................................
Passed 0.03 sec
[HANDLER_VERBOSE_OUTPUT]
test 1396
[HANDLER_OUTPUT]
Start 1396: H5JAM-N_twithub_u512_c_NONE-SETUP
[HANDLER_VERBOSE_OUTPUT]
1396: Test command: /usr/bin/cmake "-E" "copy_if_different" "testfiles/twithub.h5" "tay4.h5"
1396: Working Directory: /opt/myhdf/build/tools/test/h5jam
1396: Test timeout computed to be: 1200
[HANDLER_OUTPUT]
93/2516 Test #615: H5IMPORT-STR-H5DMP_CMP .....................................................
***Failed 0.03 sec
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