Refactor code and remove duplication

This task is about remove code duplication.

The `skaffold filter` command was added to apply debug transformations to configure container images for debugging.
See here -> https://skaffold.dev/docs/workflows/debug/#configuring-container-images-for-debugging

When `skaffold filter` command was added it did not need any information from the run context.

However, after @aaron-prindle added the [Resource Selector ](https://skaffold.dev/docs/references/yaml/#resourceSelector)config where users can configure which resource types to transform.
These list now needs to be passed to Filter command. In #7317, @tejal29 duplicated the functionality in `getTransformList`

The right way to do this is, Add `Filter()` method to the `SkaffoldRunner` which has access to the [runner.RunContext.TransformAllowList](https://github.com/GoogleContainerTools/skaffold/blob/88a27ab9f81f337fa0fe4207aa829f632a01787e/pkg/skaffold/runner/runcontext/context.go#L111) and `runCtx.runner.RunContext.TransformDenyList`

The new `Filter` method will additionally execute the `runFilter` in [here](https://github.com/GoogleContainerTools/skaffold/blob/88a27ab9f81f337fa0fe4207aa829f632a01787e/cmd/skaffold/app/cmd/filter.go#L59)