GLYCAM-Web / GLYCAM-Web/website

3D-SNFG in LiteMol bug. Name clash between PDB names and Glycam. SLB (Gal with 2,3,6 decoration) is shown as Purple Octagon, should be Yellow Circle according to glycam.

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#34 3 comments 0 reactions 3 assignees Claimed by @danwentworthart View on GitHub
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Description

**Tool:**
LiteMol. dev.glycam.org.

**Bug Description:**
3D-SNFG in LiteMol bug. Name clash between PDB names and Glycam. SLB (Gal with 2,3,6 decoration) is shown as Purple Octagon, should be Yellow Circle according to glycam. LiteMol gives precedence to the PDB names, but for our purposes could actually ignore the PDB names.

**To Reproduce:**
Go to dev.glycam.org/txt and enter: DGalp[2S,3S,6S]b1-OH. You will see a purple diamond, you should see a yellow sphere.

**Expected behavior**
You should see a yellow shere.

**How to fix**
Disable the PDB names in LiteMol. Or give the Glycam names precedence when there is a conflict. Or we upgrade to Mol* and do it there instead.

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