G-Node / G-Node/nixpy

Catch exception for old boolean type

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#483 1 comment 0 reactions 0 assignees View on GitHub
1.5
Dominant language
Python
Stars
22
Forks
29
PR merge metrics
No merged PRs in 30d

Description

Since v1.2 (2016) the file representation for boolean types has changed. Files created before this version can't be read using h5py; the old representation is not compatible with h5py at all. This hasn't been an issue in general, but it came up recently (https://github.com/G-Node/nix-odML-converter/issues/26) during some old file conversions. The way to fix these would be to use NIX (C++) or HDF5 directly to change the format of older files. Since we can't automate that with NIXPy, we should catch the exception and provide a more useful error message.

Contributor guide

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Research direction

Start by locating the code path that opens old NIX files and handles boolean-type read failures. Inspect the existing exception behavior, then verify that an incompatible pre-v1.2 file produces a clear, actionable error message rather than the raw exception.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
backend
Issue type
Bug
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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