DReichLab / DReichLab/waldo

Collaborator Libraries

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enhancement wishlist
Dominant language
Python
Stars
3
Forks
0
PR merge metrics
No merged PRs in 30d

Description

Sometimes we get already barcoded libraries and just go into Capture with them, so need to be able to add in new samples at the Capture stage and give them an S-ID. Note, these could have different barcodes than what we use, so need to be able to add that info into WALDO as well

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by tracing the existing Capture workflow and how WALDO assigns S-IDs and records barcodes. Determine how already barcoded collaborator libraries and new samples enter Capture, including alternate barcode values. Done means collaborator samples can be added at Capture, receive S-IDs, and retain their supplied barcode information.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
backend
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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