Genetic ID consistency with publication labels
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Nobody has claimed this yet.
- Dominant language
- Python
- Stars
- 3
- Forks
- 0
- PR merge metrics
- No merged PRs in 30d
Description
The import of genetic IDs keeps has separate values for the genetic ID in:
- publication label
- genetic analysis
These can disagree when the genetic ID is changed.
The genetic ID string from the publication label needs to be removed.
Contributor guide
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by tracing the genetic-ID import path and locating where the publication-label and genetic-analysis values are assigned. Remove the separate publication-label genetic ID storage, then verify that imported records retain a single consistent genetic ID when the ID changes.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- data-engineering
- Issue type
- Refactor
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Quiet
- Clarity
- Mostly clear
- Newbie friendliness
- 48/100