DReichLab / DReichLab/waldo

Load library assessments

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Dominant language
Python
Stars
3
Forks
0
PR merge metrics
No merged PRs in 30d

Description

Assessments are stored in the SequencingRun NuclearAnalysis model. These should get updated based on what libraries/samples pass quality checks after sequencing.

These appear to be missing from v45 onwards.

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Locate the SequencingRun NuclearAnalysis model and trace how library and sample quality checks update its assessments. Compare the behavior from v45 onward with the earlier behavior, then verify that assessments are restored for libraries or samples that pass sequencing quality checks.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
backend, databases
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
35/100

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