Error while working with Eigensoft command smartpca command
Nobody has claimed this yet.
- Dominant language
- C
- Stars
- 207
- Forks
- 61
- PR merge metrics
- No merged PRs in 30d
Description
I was working on computing PCA using Eigenstrat, but I encountered a few errors while running the smartpca command. I have also used all the flags as required for the execution of the smartpca command (screenshot attached).
Moreover, I am not able to run the smartpca command.
"smartpca -p Data1.par > Data1.log" (screenshot attached)
I have attached all the test files.



Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Review the attached screenshots and test files, then reproduce smartpca -p Data1.par > Data1.log with the supplied inputs. Compare the reported errors with the command's flags and document a minimal reproduction and the expected corrected behavior.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- c
- Domain
- bioinformatics
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 20/100