population label characters cut off displayed in the log file
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- Dominant language
- C
- Stars
- 207
- Forks
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Description
Dear all,
In the log file, I found that the population names are cut off to the first character. How can I change them to the full name with any parameter? Thank you very much.
Using 5 threads, and partial sum lookup algorithm.
population: 0 A 5
population: 1 B 4
population: 2 G1359A 1
number of blocks for moving block jackknife: 508
fst *1000:
A B G
A 0 14 61
B 14 0 43
G 61 43 0
s.dev * 1000000:
A B G
A 0 864 2342
B 864 0 2338
G 2342 2338 0
Best wishes,
Zhuqing
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Research direction
The issue provides no source file or test location. Start by reproducing the log output with multi-character population names, then locate the C code that formats population labels and check how the names are passed into the log and FST tables. Done means full population names appear consistently instead of only their first characters.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- c
- Domain
- bioinformatics
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100