DReichLab / DReichLab/EIG

smartpca: LAPACKE_dlange issue

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Dominant language
C
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Forks
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Description

Hello Eigensoft Team,

I was able to get EIGENSOFT along with its dependency programs lapack + openblas + gsl installed. When executing smartpca, i am getting the following error message:.

./smartpca: symbol lookup error: ./smartpca: undefined symbol: LAPACKE_dlange

Following are the static/shared objects being referenced using 'LDFLAGS' flag when compiling EIGENSOFT

libopenblas.a libopenblas_haswellp-r0.3.29.dev.a libopenblas_haswellp-r0.3.29.dev.so libopenblas.so libopenblas.so.0
liblapack.a liblapacke.a librefblas.a libtmglib.a

Any pointers is highly appreciated.

thanks

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing how smartpca is built and how the reported LDFLAGS select libopenblas, liblapacke, and related objects. Reproduce the launch failure and verify that the resulting executable resolves LAPACKE_dlange without the undefined-symbol error.

Written by the indexing model from the issue text.

Assessment

Tech stack
c
Domain
build-system
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
30/100

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