DReichLab / DReichLab/AdmixTools
qpWave - Segmentation fault (core dumped)
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- Dominant language
- C
- Stars
- 235
- Forks
- 76
- PR merge metrics
- No merged PRs in 30d
Description
Hello,
When I run qpWave in AdmixTools, I met a error: segmentation fault (core dumped)
Here is the error message
qpWave version: 1520
*** recommended that inbreed be explicitly set ***
inbreed set YES
tmp: /tmp/fsx.7302
sh: 1: qpfstats: not found
bad open /tmp/fsx.7302
(openit) can't open file /tmp/fsx.7302 of type r
error info: No such file or directory
Segmentation fault (core dumped)
What's wrong with it?
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First steps
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Research direction
Start by reproducing the qpWave failure with AdmixTools version 1520 and inspect the reported qpfstats: not found message and the temporary file /tmp/fsx.7302. Trace how qpWave handles the missing qpfstats output and the subsequent bad open before the segmentation fault; done means the failure is explained and qpWave reports it without crashing.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- c
- Domain
- cli
- Issue type
- Bug
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100