DReichLab / DReichLab/AdmixTools
zsh: segmentation fault (core dumped)
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- Dominant language
- C
- Stars
- 235
- Forks
- 76
- PR merge metrics
- No merged PRs in 30d
Description
Hi：
When I run qp3Pop in AdmixTools, I met a error:"zsh: segmentation fault (core dumped) /data/user003/soft/.conda/envs/AdmixTools/bin/qp3Pop -p parfile > logfile".
The genome of my species is very large(10Gb)
Can you help me?
Contributor guide
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start at the qp3Pop entry point and reproduce the command using the reported parfile, logfile redirection, and large genome input. Collect a stack trace or other crash details to identify where the segmentation fault occurs. Done means the cause is isolated and qp3Pop either handles this input safely or documents the supported limits.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- c
- Domain
- bioinformatics
- Issue type
- Bug
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100