DReichLab / DReichLab/AdmixTools

all individuals set ignore. Likely input problem (col 6)

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Dominant language
C
Stars
235
Forks
76
PR merge metrics
No merged PRs in 30d

Description

When I running convertf in Admixtools, it hint me that all individuals set ignore, and likely input problem (col 6).
could you tell me how to deal with this problem?

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reproducing the convertf warning with the reported input and inspect the sixth column, which the issue identifies as likely problematic. Trace how convertf reads that input and determine the input condition that causes all individuals to be ignored. Done means the cause and required input format are clear and verified by a reproduction.

Written by the indexing model from the issue text.

Assessment

Tech stack
c
Domain
bioinformatics
Issue type
Bug
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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