DReichLab / DReichLab/AdmixTools
qpAdm p-values
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- Dominant language
- C
- Stars
- 235
- Forks
- 76
- PR merge metrics
- No merged PRs in 30d
Description
Is it advisable to set a p-value threshold according to chi sq, and not to unilaterally reject models with p-values < 0.05, or can we reject models with p<0.05 regardless of chi sq values?
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First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start by locating the qpAdm implementation and any documentation or tests covering p-values and chi-squared values. Clarify the intended threshold guidance and document the decision, with an example showing how the two values should be interpreted.
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Assessment
- Tech stack
- c
- Domain
- bioinformatics
- Issue type
- Documentation
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100