DReichLab / DReichLab/AdmixTools

Feature request: New method of assessing relationship between modern and ancient populations

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Dominant language
C
Stars
235
Forks
76
PR merge metrics
No merged PRs in 30d

Description

@bumblenick
Perhaps this new promising method could be added to Admixtools?

http://www.biorxiv.org/content/early/2017/07/24/113779

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Read the linked bioRxiv paper and compare its method with the existing AdmixTools capabilities. Define the required inputs, outputs, and integration scope before implementation; completion would require a validated implementation and tests or population-data examples demonstrating the method.

Written by the indexing model from the issue text.

Assessment

Tech stack
c
Domain
bioinformatics
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
25/100

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