Update npm & bower packages

```npm WARN deprecated minimatch@0.2.14: Please update to minimatch 3.0.2 or higher to avoid a RegExp DoS issue
npm WARN deprecated minimatch@0.3.0: Please update to minimatch 3.0.2 or higher to avoid a RegExp DoS issue
npm WARN deprecated graceful-fs@1.2.3: graceful-fs v3.0.0 and before will fail on node releases >= v7.0. Please update to graceful-fs@^4.0.0 as soon as possible. Use 'npm ls graceful-fs' to find it in the tree.
npm WARN deprecated minimatch@2.0.10: Please update to minimatch 3.0.2 or higher to avoid a RegExp DoS issue
npm WARN deprecated graceful-fs@2.0.3: graceful-fs v3.0.0 and before will fail on node releases >= v7.0. Please update to graceful-fs@^4.0.0 as soon as possible. Use 'npm ls graceful-fs' to find it in the tree.
npm WARN deprecated node-uuid@1.4.7: use uuid module instead
npm WARN deprecated minimatch@1.0.0: Please update to minimatch 3.0.2 or higher to avoid a RegExp DoS issue
npm WARN deprecated tough-cookie@0.12.1: ReDoS vulnerability parsing Set-Cookie https://nodesecurity.io/advisories/130
npm WARN deprecated npmconf@2.1.2: this package has been reintegrated into npm and is now out of date with respect to npm
npm WARN prefer global jshint@2.8.0 should be installed with -g```

Start by inspecting the npm and bower package manifests and use the reported npm warnings to identify which dependencies introduce minimatch, graceful-fs, node-uuid, tough-cookie, and npmconf. Update the affected packages while preserving the project's install and build behavior, then verify that installation no longer reports these deprecated or vulnerable versions.

Written by the indexing model from the issue text.