BrainLesion / BrainLesion/preprocessing

[FEATURE] modality-specific minima definitions for BET and defacing

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#174 1 comment 0 reactions 1 assignee Claimed by @nicmuenster View on GitHub
enhancement
Dominant language
C
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39
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10
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No merged PRs in 30d

Description

* define separate background values for BET and defacing
* adjust HD-BET and Synthstrip masking and output generation
* rewrite defacing apply mask logic
* rewrite how skullstrippers mask the center modality
* do not forget about TODO comment in defacer docstring :)

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