BioPandas / BioPandas/biopandas
Renumbering residues
- Dominant language
- Python
- Stars
- 756
- Forks
- 120
- Avg merge
- 23h 8m
- Merged PRs (30d)
- 2
Description
Hi! Nice library, has a lot of potential.
Is there a way to renumber residues?
Renumbering atoms seems trivial (just assign a range to the atom_number), however renumbering residues would probably require some heavy duty group_by magic and could be built in.
(renumbering atoms could also be built in:)
Contributor guide
Research direction
No files or tests are named. Start by locating the DataFrame handling for atom_number and residue identifiers, then review how grouping is represented in the library. Done should include a clearly defined way to renumber residues, and possibly atoms, with behavior verified against the project’s existing structure-handling tests.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- pandas, python
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 4/5
- Estimated time
- 3-5 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100