Benjamin-Lee / Benjamin-Lee/vdsearch

Enable support for configurable minimum identity and seed length in find_circs

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#2 0 comments 0 reactions 0 assignees View on GitHub
Dominant language
Python
Stars
20
Forks
3
PR merge metrics
No merged PRs in 30d

Description

This issue has no description.

Contributor guide

Open the contributing guide

Research direction

Start by locating the Python implementation or command entry point for find_circs and inspect how minimum identity and seed length are currently chosen. Determine the existing defaults and the project’s test or invocation path before making the options configurable. Done means callers can set both values and existing behavior remains unchanged when they are omitted.

Written by the indexing model from the issue text.

Assessment

Tech stack
python
Domain
bioinformatics
Issue type
Feature
Difficulty
3/5
Estimated time
1-2 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
30/100

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