Proprietario
AllenNeuralDynamics
236 repository indicizzati · Vedi su GitHub
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aind-ephys-pipeline
AIND pipeline for processing extracellular electrophysiology data
Nextflow · 41 stelle
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aind-data-schema
A library that defines AIND data schema and validates JSON.
Python · 34 stelle
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openscope-community-predictive-processing
This repository serves as a hub for community-driven contributions, documentation, and project tracking of the OpenScope Predictive Proce...
Python · 26 stelle
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aind-ephys-spikesort-kilosort25-full
CodeOcean capsule for full electrophysiology analysis pipeline using Kilosort2.5 via SpikeInterface.
Python · 14 stelle
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aind-large-scale-cellpose
Large-scale cell segmentation with cellpose.
Python · 10 stelle
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Rhapso
An open-source Python toolkit for large-scale fluorescence microscopy data alignment and fusion.
Python · 9 stelle
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dynamic-foraging-task
Bonsai/Harp workflow for Dynamic Foraging with Python GUI for visualization and control
Python · 7 stelle
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aind-smartspim-pipeline
Repository that hosts the SmartSPIM pipeline code
Nextflow · 6 stelle
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TigerASI
a lightweight python interface for ASI brand Tiger Controllers
Python · 5 stelle
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wavpack-numcodecs
Numcodecs implementation of the WavPack audio codec
C · 5 stelle
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anivia
Fork of VGG VIA to better support annotation of animal pose images
JavaScript · 4 stelle
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harp.device.treadmill-driver
0326: a Harp-compatible device for controlling an instrumented mouse treadmill
Jupyter Notebook · 4 stelle
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voxel-classic
General purpose microscope control repository
Python · 4 stelle
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view
Model/View for exa-spim
Python · 4 stelle
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harp.device.lickety-split
0360: an ephys-compliant capacitive lick detector
C++ · 4 stelle
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runze-control
Python Driver for Aurora Pro Scientific (aka Runze Fluid) syringe pumps
Python · 4 stelle
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parallax
Automatic detection of probe position from multiple camera views
Python · 4 stelle
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aind-SmartSPIM-segmentation
segmentation module for SmartSPIM cloud pipeline
Python · 4 stelle
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aind-smartspim-stitch
Stitching and fusion pipeline in the cloud
Python · 4 stelle
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aind-smartspim-ccf-registration
Registration of lightsheet whole brain images to the Allen CCF V3 Atlas
Python · 4 stelle
- 216 altri repository si trovano su Vedi su GitHub
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AllenNeuralDynamics/aind-ephys-rig-qc#5 · 3 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-ephys-rig-qc#6 · 1 commento · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-ephys-rig-qc#8 · 3 commenti · 0 reazioni · 0 assegnatari ·
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Make a release Aperta
AllenNeuralDynamics/aind-ephys-rig-qc#10 · 1 commento · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-ephys-rig-qc#11 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-ephys-rig-qc#12 · 1 commento · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-ephys-rig-qc#13 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-ephys-rig-qc#14 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-slims-api#42 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-slims-api#43 · 0 commenti · 0 reazioni · 0 assegnatari ·
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UnitSpec actual unit value Aperta
AllenNeuralDynamics/aind-slims-api#47 · 0 commenti · 0 reazioni · 0 assegnatari ·
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Configurable domain Aperta
AllenNeuralDynamics/aind-slims-api#48 · 5 commenti · 0 reazioni · 0 assegnatari ·
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Add fields to Mouse object Aperta
AllenNeuralDynamics/aind-slims-api#68 · 0 commenti · 0 reazioni · 0 assegnatari ·
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Planning Notes Aperta
AllenNeuralDynamics/aind-dynamic-foraging-multisession-analysis#2 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-dynamic-foraging-multisession-analysis#3 · 0 commenti · 0 reazioni · 0 assegnatari ·
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Load NWBs in parallel Aperta
AllenNeuralDynamics/aind-dynamic-foraging-multisession-analysis#5 · 3 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-behavior-curriculum#29 · 3 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-behavior-curriculum#30 · 7 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-behavior-curriculum#31 · 2 commenti · 0 reazioni · 0 assegnatari ·
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Architectural class diagram Aperta
AllenNeuralDynamics/aind-behavior-curriculum#32 · 11 commenti · 1 reazione · 0 assegnatari ·
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AllenNeuralDynamics/aind-behavior-curriculum#34 · 1 commento · 1 reazione · 0 assegnatari ·
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Export requires graphviz Apertaenhancement
AllenNeuralDynamics/aind-behavior-curriculum#35 · 4 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-behavior-curriculum#36 · 1 commento · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-behavior-curriculum#46 · 4 commenti · 0 reazioni · 0 assegnatari ·
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blocked bug help wanted
AllenNeuralDynamics/aind-behavior-curriculum#68 · 2 commenti · 0 reazioni · 0 assegnatari ·
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enhancement
AllenNeuralDynamics/aind-behavior-curriculum#71 · 2 commenti · 0 reazioni · 0 assegnatari ·
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enhancement
AllenNeuralDynamics/aind-behavior-curriculum#74 · 0 commenti · 0 reazioni · 0 assegnatari ·
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enhancement
AllenNeuralDynamics/aind-behavior-curriculum#75 · 0 commenti · 0 reazioni · 0 assegnatari ·
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Update CICD to use uv Apertaenhancement
AllenNeuralDynamics/aind-behavior-curriculum#79 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aind-behavior-curriculum#86 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aaopto-aotf#3 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/aaopto-aotf#4 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/TigerASI#2 · 1 commento · 0 reazioni · 0 assegnatari ·
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Add comments on Baud Rate Aperta
AllenNeuralDynamics/TigerASI#3 · 0 commenti · 0 reazioni · 0 assegnatari ·
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Get/Set Unit Multipler (UM) Aperta
AllenNeuralDynamics/TigerASI#4 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/TigerASI#28 · 0 commenti · 0 reazioni · 1 assegnatario ·
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AllenNeuralDynamics/TigerASI#29 · 0 commenti · 0 reazioni · 1 assegnatario ·
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PM command isn't working Aperta
AllenNeuralDynamics/TigerASI#34 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/TigerASI#35 · 1 commento · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/TigerASI#36 · 1 commento · 0 reazioni · 1 assegnatario ·
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AllenNeuralDynamics/TigerASI#39 · 0 commenti · 0 reazioni · 1 assegnatario ·
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AllenNeuralDynamics/TigerASI#43 · 0 commenti · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/TigerASI#53 · 1 commento · 0 reazioni · 0 assegnatari ·
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AllenNeuralDynamics/TigerASI#58 · 0 commenti · 0 reazioni · 0 assegnatari ·
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Metadata
AllenNeuralDynamics/aind_data_outreach#17 · 3 commenti · 0 reazioni · 1 assegnatario ·
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Analysis
AllenNeuralDynamics/aind_data_outreach#34 · 1 commento · 0 reazioni · 1 assegnatario ·
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documentation
AllenNeuralDynamics/aind_data_outreach#36 · 5 commenti · 0 reazioni · 3 assegnatari ·
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documentation
AllenNeuralDynamics/aind_data_outreach#43 · 2 commenti · 0 reazioni · 4 assegnatari ·
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Specimen procedures have an extra field for "subject_id" with a different subject_id than the asset ApertaMetadata
AllenNeuralDynamics/aind_data_outreach#51 · 7 commenti · 0 reazioni · 1 assegnatario ·
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Metadata
AllenNeuralDynamics/aind_data_outreach#53 · 0 commenti · 0 reazioni · 1 assegnatario ·