AllenNeuralDynamics / AllenNeuralDynamics/comb

Neuropil traces

Open
#10 0 comments 0 reactions 0 assignees View on GitHub
Dominant language
Python
Stars
1
Forks
0
PR merge metrics
No merged PRs in 30d

Description

**Describe the bug**
`def get_neuropil_traces( )` not returning the correct trace.
'FC' from neuropil_correction_h5 is "corrected fluorescence", not "neuropil trace".
Also, the pipeline does not have 'RMSE' any more.

**Expected behavior**
COMB should have a separate functions and properties for `neuropil correction` and `neuropil traces`.
It will be helpful to have neuropil_traces.h5 in file_paths.

Contributor guide

No contributing guide indexed for this repository

Assessment

This issue has not been assessed yet.

Get new issues in your inbox

A short digest of beginner-friendly GitHub issues.