AllenNeuralDynamics / AllenNeuralDynamics/aind-ng-link
Update neuroglancer capsule for new zarr templates
- 主要言語
- Python
- スター
- 2
- フォーク
- 3
- PR マージ指標
- 30日以内にマージされた PR はありません
説明
This NG library has been extensively used in the HCR pipeline with little pushing of these changes to the project.
There should be a consolidation of changes that include the following features:
1. Support for new zarr 2 or 3.0 formats (both path and data type)
2. Support for reading tile position from xml (legacy) and acquisition.json (intended)
Nice to haves:
4. Support for reading channel metadata such as probed gene names from other metadata and adding to channel name(procedures or data description?) Refer to other ticket on reworking processing_manifest.json capsule here:
5. Support for displaying precomputed annotations if indicated
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