AllenInstitute / AllenInstitute/spatial_compare

tuning/debugging KDE output

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Dominant language
Jupyter Notebook
Stars
7
Forks
8
Avg merge
2h 24m
Merged PRs (30d)
1

Description

great new feature #27 gives smoothed outputs to spatial_detection_score and the results differ in some ways from the histogram. figure out the source of this difference and accommodate any real differences in an easy-to-understand visualization

Contributor guide

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First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start at the spatial_detection_score feature from issue #27 and compare its smoothed KDE outputs with the existing histogram results. Determine which differences are expected, then define an easy-to-understand visualization that shows them; done means the source of the discrepancies is documented and the comparison is usable.

Written by the indexing model from the issue text.

Assessment

Tech stack
jupyter-notebook
Domain
data-visualization
Issue type
Bug
Difficulty
4/5
Estimated time
3-5 days
Activity status
Stale
Clarity
Needs clarification
Newbie friendliness
30/100

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