AllenInstitute / AllenInstitute/cell_type_mapper
Generating taxonomy from 2 references?
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- Dominant language
- Python
- Stars
- 55
- Forks
- 9
- PR merge metrics
- No merged PRs in 30d
Description
Hi,
I wondered if it was possible to generate a taxonomy from 2 sources? Specifically the Allen mouse brain atlas and a mouse spleen dataset?
Thanks in advance!
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Research direction
The request asks whether a taxonomy can be generated from both the Allen mouse brain atlas and a mouse spleen dataset, but it names no files, tests, or entry points. First clarify the expected taxonomy and how the two sources should be combined; done would require an agreed implementation scope and validation against both datasets.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- python
- Domain
- bioinformatics
- Issue type
- Feature
- Difficulty
- 5/5
- Estimated time
- Over a week
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 25/100