AllenInstitute / AllenInstitute/MIES

Switch to precalculating DAQ acqusition order instead of going step by step

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#39 0 comments 0 reactions 0 assignees View on GitHub

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Backlog DA_Ephys DataAcquisition enhancement Indexing Issue Review 2025 Quantum leap
Dominant language
IGOR Pro
Stars
30
Forks
11
Avg merge
1d 40m
Merged PRs (30d)
8

Description

  • Must support RA/indexing/etc
  • Fix currently broken things like outerset randomization
  • Add support for innerset randomization
  • Visualize data which will be sent to the hardware. Use case: Future sets not yet acquired
  • would enable per headstage sweep skipping
  • would reduce compute between sweeps

Related to #33.

Contributor guide

Open the contributing guide

First steps

  1. Read the whole issue, then the project's contributing guide.
  2. Comment on the issue to say you are picking it up — it saves two people doing the same work.
  3. Fork the repository and make your change on a branch.
  4. Open a pull request that references the issue number.

Research direction

Start by reviewing the DAQ acquisition flow and related issue #33. Define how precalculated acquisition order should support RA/indexing, outerset and innerset randomization, future-set visualization, per-headstage sweep skipping, and reduced between-sweep computation; completion requires these listed use cases to work.

Written by the indexing model from the issue text.

Assessment

Domain
data, embedded-iot
Issue type
Feature
Difficulty
5/5
Estimated time
Over a week
Activity status
Stale
Clarity
Mostly clear
Newbie friendliness
25/100

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