Important code which is not executed in tests

Latest coverage data: https://byte-physics.de/public-downloads/aistorage/transfer/report/coverage

Using UTF code coverage feature it was revealed that the following code paths are never executed:

• Locked/unlocked indexing with TTL channels
• OOD_CalculateOffsets the condition yoked || setNr < numSets - 1 is never true
• ED_AddEntryToLabnotebook with finite tolerance
• DQ_StopOngoingDAQHelper: if(IsDeviceActiveWithBGTask(panelTitle, TASKNAME_FIFOMON)) and if(!RA_IsFirstSweep(panelTitle)) are never true.
• Add generic test code for excecuting the _GetHelp function of analysis functions, see #1216
• Not all branches of PSQ_EvaluateBaselineProperties are executed, see #1386
• Get rid of MSQ_EvaluateBaselineProperties as it is not executed
• MSQ_FastRheoEst: newDAScaleValue = DAScale[i] + stepSize[i] is never executed
• SC_SpikeControl: The true path here is never hit

00000020|00000000|00000020|				if(SC_SkipsExhausted(minTrials, s.params))
________|________|________|					// if the minimum trials value has already reached the maximum
________|________|________|					// allowed trials, we are done and the set has not passed

• HW_WriteDigital/HW_ReadDigital
• HW_DisableYoking/HW_EnableYoking
• DAP_FormatCommentString/DAP_AddUserComment
• DAP_UnlockCommentNotebook/DAP_ClearCommentNotebook
• DAP_DeleteStimulusSet
• MIES_Dandi.ipf
• DQ_GetNumDevicesWithDAQRunning
• Add test override code to a wrapper function for GetKeyState so that DQ_STOP_REASON_ESCAPE_KEY can be tested as well.
• DQS_StartDAQSingleDevice and aborting DC_Configure
• DC_GetConfiguration #1410:

00001144|00000000|00001144|				if(scalingZero && (indexingLocked || !indexing) && setCycleCount > 0)
________|________|________|					DACAmp[i][%DASCALE] = 0
________|________|________|				endif

• Done in #1237.

00000128|00000000|00000128|			if(powerSpectrum)
________|________|________|				DACAmp[i][%TPAMP] = 0
________|________|________|			endif

• DC_GenerateStimsetFingerprint is that ever called with dataAcqOrTP == TEST_PULSE_MODE? -> Change to assert, #1409
• DC_CheckIfDataWaveHasBorderVals

00000913|00000000|00000913|			if(V_Value != -1)
________|________|________|				return [1, V_row, V_col]
________|________|________|			endif

• DC_CalculateChannelColumnNo with random acquisition, 3601294f (DAP_CheckProc_RandomRA: Fix random acquisition checkbox, 2023-05-22) was supposed to fix that but somehow didn't
• EP_AddEpochsFromStimSetNote

00000406|________|________|			else
________|________|________|				DC_AddEpoch(panelTitle, channel, epochBegin, epochEnd, EPOCH_BASELINE_REGION_KEY, 2, lowerlimit = stimsetBegin, upperlimit = stimsetEnd)
________|________|________|			endif

• EP_AddEpochsFromStimSetNote

412|________|________|________|            else

413|________|________|________|                tags = ReplaceStringByKey(EPOCH_SUBTYPE_KEY, "", EPOCH_BASELINE_REGION_KEY, STIMSETKEYNAME_SEP, EPOCHNAME_SEP)

414|________|________|________|                EP_AddEpoch(device, channel, epochBegin, epochEnd, tags, shortNameEpTypePTBaseline, 2, lowerlimit = stimsetBegin, upperlimit = stimsetEnd)

• FindIndizes: prop branches
• NWB_AppendStimset: custom waves are never written
• NWB_WriteStimsetTemplateWaves with third party stimsets
• NWB_LoadStimset: custom waves are never read
• MIES_PressureControl.ipf
• GetPopupMenuList/ParsePopupMenuValue with PGC_POPUPMENULIST_TYPE_BUILTIN
• PGC_SetAndActivateControl: CONTROL_TYPE_VALDISPLAY/PGC_POPUPMENULIST_TYPE_BUILTIN/missing window
• PGC_SetAndActivateControl: SetVariable see #1408
• RA_StartMD/RA_Start: where numTotalSweeps == 1, see #1411
• TP_ROAnalysis with buffer size > 1
• Foreground DAQ
• Foreground TP
• AFH_CheckAnalysisParameter

855|________|________|________|            // non present required parameters are an error

856|________|________|________|            errorMessages[index++] = name + ": is required but missing"

857|________|________|________|            continue

• BSP_ButtonProc_RestoreData
• CA_DeleteCacheEntry/CA_OutputCacheStatistics
• HW_NI_PrintPropertiesOfDevices
• DAP_TurnOffAllChannels
• DQ_ApplyAutoBias

334|________|________|________|        AI_UpdateAmpModel(device, "check_DatAcq_HoldEnable", headStage, value=1, sendToAll=0)

335|________|________|________|        AI_UpdateAmpModel(device, "setvar_DataAcq_Hold_IC", headstage, value=current * ONE_TO_PICO,sendToAll=0)

• DQ_GetNumDevicesWithDAQRunning
• Repeated acquisition with randomization, see #1700
• MIES_GuiPopupMenuExt.htm, #822
• MIES_LogbookViewer.htm, #822
• CreateTiledChannelGraph: dDAQ, oodDAQ, overlay channels, unassoc DA/AD, TTL
• ST_GetStimsetParameters/ST_GetStimsetParameterAsString/ST_RemoveStimSet
• TP_GetNumDevicesWithTPRunning
• StoreWaveOnDisk/LoadWaveFromDisk
• DC_MakeHelperWaves with DECIMATION_NONE

Start with the linked coverage report and the unchecked entries in this issue, such as Locked/unlocked indexing with TTL channels, SC_SpikeControl, and DAP_UnlockCommentNotebook/DAP_ClearCommentNotebook. Read the named functions and their existing tests to identify one focused gap. Done means the selected paths are exercised and the coverage report confirms the improvement.