AllenInstitute / AllenInstitute/AllenSDK
The trials for some QC-passing Behavior Experiments fail to load
Nobody has claimed this yet.
- Dominant language
- Jupyter Notebook
- Stars
- 398
- Forks
- 163
- PR merge metrics
- No merged PRs in 30d
Description
@nicain I've been trying to load QC-passing experiments using the LIMS api. However, I'm encountering that many of the trials dataframe from these experiment IDs fail to load. I've attached a GIST to reproduce the errors:
https://gist.github.com/Rylan-L/b87184889623b477242f502ce6f934d9
Thoughts?
@matchings
Contributor guide
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start with the attached Gist and reproduce the failures against the LIMS API for the referenced QC-passing experiment IDs. Trace why the trials dataframes fail to load and confirm completion when those trials load successfully; the issue names no repository files or tests.
Written by the indexing model from the issue text.
Assessment
- Domain
- api, data
- Issue type
- Bug
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Needs clarification
- Newbie friendliness
- 35/100