AllenInstitute / AllenInstitute/ACE
Add cortical layer from GA study to MTG translation table
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- Dominant language
- R
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- 4
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Description
https://raw.githubusercontent.com/AllenInstitute/ACE/main/data/MTG_cell_metadata.csv.gz
This table should include cortical layer, to address the issue from the Community Forum post:
https://community.brain-map.org/t/layer-based-annotation-of-whb10xv3-dataset/4579
Contributor guide
No contributing guide indexed for this repository
First steps
- Read the whole issue, then the project's contributing guide.
- Comment on the issue to say you are picking it up — it saves two people doing the same work.
- Fork the repository and make your change on a branch.
- Open a pull request that references the issue number.
Research direction
Start with data/MTG_cell_metadata.csv.gz and inspect the linked Community Forum post for the GA study's cortical-layer annotation and its relationship to the MTG translation table. Confirm where the translation table is represented in the repository, then verify that the resulting table includes cortical layer information matching the requested annotation.
Written by the indexing model from the issue text.
Assessment
- Tech stack
- r
- Domain
- data
- Issue type
- Feature
- Difficulty
- 3/5
- Estimated time
- 1-2 days
- Activity status
- Stale
- Clarity
- Mostly clear
- Newbie friendliness
- 45/100